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Discover our collections!

A collection consists of several datasets that are in some way connected. They can belong to the same research series, research infrastructure, or come from the same research expedition.

We also provide access to the special collections “Swedish party programs and election manifestos” and the Swedish Gallup Institute's public opinion surveys from 1942 to 1956.

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Genetics

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Karolinska Institutet

  • Colony whole genome sequencing of hematopoietic stem and progenitor cell-derived colonies from 2 dual SF3B1-mutant MDS-RS patients

This dataset consists of whole genome sequencing data from single cell-derived colonies obtained through colony-forming assays and culture of FACS-purified hematopoietic stem cells (HSC), multipotent progenitors (MPP), m...

  • Pedro Luis Moura, Karolinska Institutet, Department of Medicine, Huddinge/ Center for Hematology and Regenerative Medicine (HERM)
  • Eva Hellström-Lindberg, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
Published: 2024-04-18
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Karolinska Institutet

  • TARGET-seq genotyped single-cell RNA sequencing of hematopoietic stem cells and megakaryocyte-erythroid progenitor cells from a dual SF3B1-mutant MDS-RS patient and 3 healthy donors

This dataset consists of TARGETseq (genotype-targeted plate-based SmartSeq2) single-cell RNA sequencing data of purified hematopoietic stem cells (HSC) and megakaryocyte-erythroid progenitors (MEP) from the bone marrow o...

  • Pedro Luis Moura, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
  • Eva Hellström-Lindberg, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
Published: 2024-04-18
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Karolinska Institutet

  • 10X single-cell RNA sequencing of hematopoietic stem and progenitor cells from a dual SF3B1-mutant MDS-RS patient and a healthy donor

This dataset consists of 10X single-cell RNA sequencing data of bone marrow cells (CD34+ stem cells) obtained from two clinical visits of a dual SF3B1-mutant MDS-RS patient (Patient 1 in the associated publication: visit...

  • Pedro Luis Moura, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
  • Eva Hellström-Lindberg, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
Published: 2024-04-18
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Karolinska Institutet

  • Smart-seq3 and Smart-seq3xpress single-cell RNA sequencing of bone marrow cells from MDS-RS patients

This dataset consists of Smart-seq3 single-cell RNA sequencing data of purified RS from the bone marrow and peripheral blood of 2 MDS-RS patients; and Smart-seq3xpress single-cell RNA sequencing data of FACS-sorted hemat...

  • Pedro Luis Moura, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
  • Eva Hellström-Lindberg, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
Published: 2023-10-19
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Karolinska Institutet

  • 10X single-cell RNA sequencing of bone marrow cells from MDS-RS patients and healthy donors

This dataset consists of single-cell RNA sequencing data of bone marrow cells (CD34+ stem cells, GPA+ erythroblasts, ring sideroblasts and mononuclear cells) obtained from multiple healthy bone marrow donors and MDS-RS p...

  • Pedro Luis Moura, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
  • Eva Hellström-Lindberg, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
Published: 2023-10-19
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Karolinska Institutet

  • Bulk RNA sequencing of bone marrow cells from MDS-RS patients and healthy donors

This dataset consists of bulk RNA sequencing data of MACS-separated bone marrow cells (CD34+ stem cells, GPA+ erythroblasts, CD71+ reticulocytes, ring sideroblasts and siderocytes) obtained from multiple healthy bone mar...

  • Pedro Luis Moura, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
  • Eva Hellström-Lindberg, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
Published: 2023-10-19
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Karolinska Institutet

  • TMT proteomics of erythroblasts from healthy donors and erythroblasts/ring sideroblasts from MDS-RS patients

This dataset consists of semi-quantitative 10-plex TMT proteomics analysis of FACS-separated bone marrow cells obtained from 3 healthy bone marrow donors and 3 MDS-RS patients. The objective of this data collection was t...

  • Pedro Luis Moura, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
  • Eva Hellström-Lindberg, Karolinska Institutet, Department of Medicine, Huddinge / Center for Hematology and Regenerative Medicine (HERM)
Published: 2023-10-19
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University of Gothenburg

  • Dataset: Evolution of copper tolerance in the coastal diatom Skeletonema marinoi

This project explores if, and how, contemporary populations the costal diatom Skeletonema marinoi have evolved in response to mining pollution. The study systems are two semi-enclosed inlets in the Baltic Sea, where one,...

  • Björn Andersson, University of Gothenburg, Department of Marine Sciences
Published: 2023-07-04
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University of Gothenburg

  • RNA sequencing data from patients with heart disease and controls

RNA sequencing analysis of atrial cardiac tissue from patients undergoing coronary artery bypass grafting (CABG) or aortic valve replacement (AVR) was performed and compared with atrial cardiac tissue from organ donors a...

  • Victoria Rotter Sopasakis, University of Gothenburg, Department of Laboratory Medicine, Institute of Biomedicine
  • Lillemor Mattsson Hultén, University of Gothenburg, Department of Laboratory Medicine, Institute of Biomedicine
Published: 2023-04-17
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Karolinska Institutet

  • Agilent gene expression microarray raw data for STO-3

Agilent microarray profiling of primary breast tumors in the Stockholm tamoxifen trial (STO-3) was performed in 2014. The STO-3 trial enrolled 1780 postmenopausal lymph node-negative patients with tumors smaller than or ...

  • Annelie Johansson, Karolinska Institutet, Department of Oncology-Pathology
  • Linda Lindström, Karolinska Institutet, Department of Oncology-Pathology
Published: 2022-03-02
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  • Accessibility levels for data

  • SND Logo
    Access to data through SND
  • Access to data through an external actor
  • Data are freely accessible
  • Access to data is restricted or accessible by request
  • Read more about our accessibility levels.

Discover our collections!

A collection consists of several datasets that are in some way connected. They can belong to the same research series, research infrastructure, or come from the same research expedition.

We also provide access to the special collections “Swedish party programs and election manifestos” and the Swedish Gallup Institute's public opinion surveys from 1942 to 1956.